PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G082500.1
Common NamePHAVU_011G082500g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family TCP
Protein Properties Length: 167aa    MW: 18021.4 Da    PI: 7.6834
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G082500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP98.99e-3120116689
                 TCP   6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 
                         ++++++hTkv+gR RRv l+ +caar+F+L++eLG+++ ++ti WLl+qa+p+i+ +tgt+ s+++   ++ss ss+s    +        
  Phvul.011G082500.1  20 RSKKDRHTKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIISATGTGISPSMVDVTSSSPSSSS----Psslptlpl 106
                         579*********************************************************888882221111112222....111224333 PP

                 TCP  89 .........k 89 
                                  +
  Phvul.011G082500.1 107 psegdnvvgQ 116
                         3333333332 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.3E-2621115IPR005333Transcription factor, TCP
PROSITE profilePS5136922.8052276IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MASKTPLPLQ ATNTKLPSLR SKKDRHTKVN GRERRVLLPP LCAARIFQLT RELGYKTHGE  60
TIGWLLRQAE PSIISATGTG ISPSMVDVTS SSPSSSSPSS LPTLPLPSEG DNVVGQHASS  120
VHLSTDNEIN SKETFPPFDF DVFANFNVEF SAAEIEMLQS LMTRLG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007132292.11e-119hypothetical protein PHAVU_011G082500g
SwissprotQ53PH29e-29PCF3_ORYSJ; Transcription factor PCF3
TrEMBLV7AJL71e-119V7AJL7_PHAVU; Uncharacterized protein
STRINGGLYMA11G20201.13e-71(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.14e-29TCP family protein